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wkliao wants to merge 416 commits into
Parallel-NetCDF:masterfrom
wkliao:develop
Closed

Develop#228
wkliao wants to merge 416 commits into
Parallel-NetCDF:masterfrom
wkliao:develop

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@wkliao wkliao commented May 26, 2026

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wkliao added 29 commits June 5, 2026 15:03
…lows

Note configure with --enable-debug will enable safe mode
… workflows

Note configure with --enable-debug will enable safe mode
…orkflows

Note configure with --enable-debug will enable safe mode
For sequential runs, use seq_runs.sh
…e workflows

Note configure with --enable-debug will enable safe mode
Rename wrap_runs.sh to seq_runs.sh
…m is not set

* Note in ROMIO, MPICH 4.3.2, when creating a new file and both hints
  striping_factor and striping_unit are not set, they will inherit from
  the parent folder's.
* However, when hint striping_factor is set, but not striping_unit,
  striping_unit will not inherit from the parent folder. Instead, the system
  default, usually 1 MiB, will be used.
When hint nc_stripng is set to "inherit", if the user also set striping_factor,
but not striping_unit, then ROMIO (MPICH 4.3.2) will produces a file with
striping_unit equal to Lustre default setting, instead of inheriting from the
parent folder. Therefore, it is necessary to first query both folder's striping
factor and unit, in case one of them did not set by the user and can inherit
from the folder.
* error out when the two input file names are identical
Two options of hint pnc_driver: "pncio" and "mpiio"
'make ptest6' failed when comparing two output files generated from INA
and without INA enabled.
PNC_comm_attr now contains attributes to be cached in an MPI
communicator, which includes both compute nodes information
and INA metadata.
…llback

int *ids;                /* [nprocs] node ID of each MPI process
int *nonaggr_ranks;      /* [num_nonaggrs] ranks of
int *ina_ranks;          /* [num_ina_aggrs] rank IDs of
MPI_Comm  ina_comm;      /* communicator of all INA aggregators
wkliao added 28 commits June 5, 2026 15:03
Also add comments about the minimum file size for CDF-1/2 files are
of size 32 bytes, and CDF-5 files 48 bytes.
PNETCDF_DRIVER_NETCDF4
PNETCDF_THREAD_SAFE
PNETCDF_SUBFILING
PNETCDF_ERANGE_FILL
PNETCDF_PROFILING
Add info about PSDW 2025 paper.
Remove unused variables.
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3 participants